https://ogma.newcastle.edu.au/vital/access/ /manager/Index en-au 5 Prospects of endophytic fungi as a natural resource for the sustainability of crop production in the modern era of changing climate https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:50381 Wed 28 Feb 2024 14:46:50 AEDT ]]> Towards an in-depth characterization of Symbiodiniaceae in tropical giant clams via metabarcoding of pooled multi-gene amplicons https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:44982 Tridacna maxima) samples obtained from nine French Polynesian locations and tested a dual-index sequence library preparation method that pools and simultaneously sequences multiple Symbiodiniaceae gene amplicons per sample for in-depth biodiversity assessments. The rationale for this approach was to allow the metabarcoding of multiple genes without extra costs associated with additional single amplicon dual indexing and library preparations. Our results showed that the technique effectively recovered very similar proportions of sequence reads and dominant Symbiodiniaceae clades among the three pooled gene amplicons investigated per sample, and captured varying levels of phylogenetic resolution enabling a more comprehensive assessment of the diversity present. The pooled Symbiodiniaceae multi-gene metabarcoding approach described here is readily scalable, offering considerable analytical cost savings while providing sufficient phylogenetic information and sequence coverage.]]> Wed 26 Oct 2022 09:00:33 AEDT ]]> Towards reproducible metabarcoding data: Lessons from an international cross-laboratory experiment https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:46011 Tue 08 Nov 2022 18:10:02 AEDT ]]> Genome-wide analysis of DNA methylation in single cells using a post-bisulfite adapter tagging approach https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:45991 Thu 10 Nov 2022 10:14:22 AEDT ]]> DNA metabarcoding confirms primary targets and breadth of diet for coral reef butterflyfishes https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:50608 Mon 31 Jul 2023 12:50:46 AEST ]]>